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ABOUT THIS RECORD
ID:
MNEST002088
species:
Poncirus trifoliata
miRNA family:
MIR159
source:
miRNEST
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTC
miRNA*
GAACTCCTTGAAGTCCAAAAG
mismatches:
4
bulges:
0
View larger
pre-miRNA
ATGTTAAAGAGTG
GAACTCCTTGAAGTCCAAAAG
AGGGTCTAGCAAGGGTAAATTGAGCTGGTGAGCTATGGATCCCCAGTCCCTAGTATCACATTTTAA
GGGTTGGTTCTTGATGAATGATGATTATAGGCCTGTGGCTTACTTATCTCTGAAACCTTTATTACCCCTTAAACTTTTTCCTTT
TTTGGATTGAAGGGAG
CTCTC
AGTTTCTACC
dot-bracket secondary structure
.......((((.(
((.((((((..((((((((((
((((...((...((((((...(((..((((((((((((..........((((..(((((((((..(
(((.....))))...))))).))))..)))).))))))))))))...)))...........))))))......))...))))))
))))))))..))))))
.))).
...))))...
SIMILARITIES
miRBase
csi-MIR159
:
1e-29
PMRD
ptc-miRf10271-akr
:
0.00000005
microPC
miR159
:
4e-36
UniProt
no hits
RFAM
MIR159: 0.0000000002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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