ABOUT THIS RECORDspecies: Poncirus trifoliata
miRNA family: MIR164
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TGGAGAAGCAGGGCACGTGCA miRNA* CATGTGCCCTTCTTCCCCATC mismatches: 4 bulges: 0 |
pre-miRNA
GTAGAGCAAGATGGAGAAGCAGGGCACGTGCATTACTAACTCAACCGCACATACATCTACTAACAAAAATTAATTAATCCACACATTTTGAAGAAACCAA
ATCAAGAAGCAGGAGGCTCTTTCTGTTGTTATAGCTCAGTCATGAGTTGAGTTATTTCTTCATGTGCCCTTCTTCCCCATCATGACCGC
dot-bracket secondary structure
......((.(((((.((((.((((((((((......(((((((((((.........(((.((((((...........(((.....((((((.........
.))))))....)))...........)))))))))........)).)))))))))......)))))))))).)))).))))).)).....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTAGAGCAAGATGGAGAAGCAGGGCACGTGCATTACTAACTCAACCGCACATACATCTACTAACAAAAATTAATTAATCCACACATTTTGAAGAAACCAA
ATCAAGAAGCAGGAGGCTCTTTCTGTTGTTATAGCTCAGTCATGAGTTGAGTTATTTCTTCATGTGCCCTTCTTCCCCATCATGACCGC
dot-bracket secondary structure
......((.(((((.((((.((((((((((......(((((((((((.........(((.((((((...........(((.....((((((.........
.))))))....)))...........)))))))))........)).)))))))))......)))))))))).)))).))))).)).....
SIMILARITIES| miRBase ctr-MIR164: 8e-105 PMRD csi-miR164: 2e-87 microPC miR164: 3e-92 | UniProt no hits RFAM MIR164: 8e-16 | most similar mature miRNAs |
Identical with: ctr-MIR164 from miRBase (MNEST041278) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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