ABOUT THIS RECORDspecies: Poncirus trifoliata
miRNA family: MIR530
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TGCATTTGCACCTGCATCTTG miRNA* AGGTGCAGTTGCAAGTGCAGA mismatches: 1 bulges: 0 |
pre-miRNA
TATCCTTTATCTGCATTTGCACCTGCATCTTGTTGCGTTATCTGGTTCTGGTTCGTAAAAGCCAAAGCACAAGAAGAGCCAATAGCAGTCGGCAGATATG
GTGGCAGCATGGAGTTATATGCATCAAGGTGCAGTTGCAAGTGCAGATGAATGCC
dot-bracket secondary structure
.....((((((((((((((((.((((((((((.(((((..(((.(((.(((((......))))).)))...)))((..(((...((.((((.((....))
.)))).)).)))..))..))))).)))))))))).))))))))))))))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TATCCTTTATCTGCATTTGCACCTGCATCTTGTTGCGTTATCTGGTTCTGGTTCGTAAAAGCCAAAGCACAAGAAGAGCCAATAGCAGTCGGCAGATATG
GTGGCAGCATGGAGTTATATGCATCAAGGTGCAGTTGCAAGTGCAGATGAATGCC
dot-bracket secondary structure
.....((((((((((((((((.((((((((((.(((((..(((.(((.(((((......))))).)))...)))((..(((...((.((((.((....))
.)))).)).)))..))..))))).)))))))))).))))))))))))))))....
SIMILARITIES| miRBase csi-MIR530b: 3e-79 PMRD ptc-miRf11519-akr: 0.000000008 microPC miR530: 4e-72 | UniProt no hits RFAM MIR530: 0.0000001 | most similar mature miRNAs |
Identical with: miR530 from microPC (MNEST045910) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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