ABOUT THIS RECORDspecies: Poncirus trifoliata
miRNA family: MIRf1205
source: miRNEST
SEQUENCE & STRUCTURE| miRNA GGCAGAGCATGGATGGAACTA miRNA* GCTCCTCCCATGCACTGCCTC mismatches: 4 bulges: 0 |
pre-miRNA
GAGACAAAAGACGGGGAACAGGCAGAGCATGGATGGAACTATTAACAGGTTCCCTGTTTTGGCTCCTCCCATGCACTGCCTCTTCCCTGGCTCTCTGCC
dot-bracket secondary structure
((((.......(((((((.((((((.((((((..(((.(((..((((((...)))))).))).)))..)))))).)))))).)))))))..))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAGACAAAAGACGGGGAACAGGCAGAGCATGGATGGAACTATTAACAGGTTCCCTGTTTTGGCTCCTCCCATGCACTGCCTCTTCCCTGGCTCTCTGCC
dot-bracket secondary structure
((((.......(((((((.((((((.((((((..(((.(((..((((((...)))))).))).)))..)))))).)))))).)))))))..))))....
SIMILARITIES| miRBase csi-MIR408: 1e-46 PMRD cpt-miR408: 5e-46 microPC miR408: 4e-19 | UniProt no hits RFAM MIR408: 2e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
