ABOUT THIS RECORDspecies: Poncirus trifoliata
miRNA family: MIR408
source: miRNEST
SEQUENCE & STRUCTURE| miRNA CGGGGAACAGGCAGAGCATGG miRNA* ATGCACTGCCTCTTCCCTGGC mismatches: 2 bulges: 0 |
pre-miRNA
GAGACAAAAGACGGGGAACAGGCAGAGCATGGATGGAACTATTAACAGGTTCCCTGTTTTGGCTCCTCCCATGCACTGCCTCTTCCCTGGCTCTCTGCC
dot-bracket secondary structure
((((.......(((((((.((((((.((((((..(((.(((..((((((...)))))).))).)))..)))))).)))))).)))))))..))))....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GAGACAAAAGACGGGGAACAGGCAGAGCATGGATGGAACTATTAACAGGTTCCCTGTTTTGGCTCCTCCCATGCACTGCCTCTTCCCTGGCTCTCTGCC
dot-bracket secondary structure
((((.......(((((((.((((((.((((((..(((.(((..((((((...)))))).))).)))..)))))).)))))).)))))))..))))....
SIMILARITIES| miRBase csi-MIR408: 1e-46 PMRD cpt-miR408: 5e-46 microPC miR408: 4e-19 | UniProt no hits RFAM MIR408: 2e-18 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
