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ABOUT THIS RECORD
ID:
MNEST002125
species:
Populus nigra
miRNA family:
MIRf99
source:
miRNEST
Taxonomy by NCBI:
Populus nigra
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAACCGAACCGAACCGAAAA
miRNA*
TCCGGTTCGGTCCGGTTCTGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GGGTGAGCATT
TCCGGTTCGGTCCGGTTCTGG
GTCAAAATAAATAACAAAATCAAAATTATTTTTTTTCAAATTTT
TGAACCGAACCGAACCGAAAA
CTA
GTTCA
dot-bracket secondary structure
...(((((.((
(.(((((((((.((((((.((
((.((((.((((((...........)))))).))))...)))).
.)))))).))))))))).)))
...
)))))
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf12484-akr
:
0.00000008
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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