miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST002125
species: Populus nigra
miRNA family: MIRf99
source: miRNEST

Taxonomy by NCBI:
Populus nigra Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAACCGAACCGAACCGAAAA

miRNA*
TCCGGTTCGGTCCGGTTCTGG

mismatches: 3
bulges: 0

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pre-miRNA
GGGTGAGCATTTCCGGTTCGGTCCGGTTCTGGGTCAAAATAAATAACAAAATCAAAATTATTTTTTTTCAAATTTTTGAACCGAACCGAACCGAAAACTA
GTTCA


dot-bracket secondary structure
...(((((.(((.(((((((((.((((((.((((.((((.((((((...........)))))).))))...))))..)))))).))))))))).)))...
)))))



SIMILARITIES
miRBase no hits

PMRD ptc-miRf12484-akr: 0.00000008

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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