miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST002154
species: Populus tremula
miRNA family: MIRf519
source: miRNEST

Taxonomy by NCBI:
Populus tremula Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATATAACATCATGAGCAATCA

miRNA*
 ATTGCTCATGATGGTATGCAA

mismatches: 3
bulges: 0
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pre-miRNA
 GATTCAAACTTTCGAAGAATGATATAACATCATGAGCAATCACTCTGCTGCAACATTCCAAGGGTAATTGCTCATGATGGTATGCAATTCTAATTAAAAA
TGGCC

dot-bracket secondary structure
...............(((((..((((.(((((((((((((.(((((..............))))).))))))))))))).))))..))))).........
.....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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