miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST002155
species: Populus tremula
miRNA family: MIRf45
source: miRNEST

Taxonomy by NCBI:
Populus tremula Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTGTATAGGGGAGCTTCTGGT

miRNA*
ATTAAGCTCCCCTGAAGAGA

mismatches: 5
bulges: 1

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pre-miRNA
ATTTCCTCATCTTGTATAGGGGAGCTTCTGGTTCTTCTGAGGTAAATATTAAGCTCCCCTGAAGAGATCTGCCCT

dot-bracket secondary structure
........(((((...(((((((((((...(((..((...))..)))...)))))))))))..))))).......

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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