miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST002163
species: Populus tremula
miRNA family: MIRf18
source: miRNEST

Taxonomy by NCBI:
Populus tremula Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
GGAAAGTGAATTCCTGGAATG

miRNA*
TTCTGGGAAAGTATTTTCCGA

mismatches: 3
bulges: 0

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pre-miRNA
GTGAATTCCGGGGAAAGTGAATTCCTGGAATGTGAATTCTGGGAAAGTATTTTCCGATGTTTGGT

dot-bracket secondary structure
...........((((((((..((((((((((....))))))))))..))))))))..........

SIMILARITIES

miRBase no hits

PMRD ptc-miRf11872-akr: 0.0007

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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