ABOUT THIS RECORDspecies: Populus tremula x Populus alba
miRNA family: MIRf746
source: miRNEST
Taxonomy by NCBI:
Populus tremula x Populus alba Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGGCGGGGATTGAACGGAGG miRNA* TCTTTACTTACCGTCTTAC mismatches: 4 bulges: 2 |
pre-miRNA
TGGAAGAACTTGACCGTTGGATTGGCGGGGATTGAACGGAGGGTCGATCCTTTATCAACCTTCTTTACTTACCGTCTTACAGAAGTCAACATTCTATT
dot-bracket secondary structure
.((((....(((((..(((....(((((.((.(((..(((((((.(((.....))).)))))))))).)).)))))...)))..)))))..))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TGGAAGAACTTGACCGTTGGATTGGCGGGGATTGAACGGAGGGTCGATCCTTTATCAACCTTCTTTACTTACCGTCTTACAGAAGTCAACATTCTATT
dot-bracket secondary structure
.((((....(((((..(((....(((((.((.(((..(((((((.(((.....))).)))))))))).)).)))))...)))..)))))..))))...
SIMILARITIES| miRBase no hits PMRD ptc-miRf10132-akr: 0.000000000005 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
