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ABOUT THIS RECORD

ID: MNEST002194
species: Populus tremula x Populus tremuloides
miRNA family: miR168a
source: miRNEST

Taxonomy by NCBI:
Populus tremula x Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCCGCCTTGCATCAACTGAAT

miRNA*
 TCGCTTGGTGCAGCGTCGGGAA

mismatches: 2
bulges: 1
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pre-miRNA
 GCGGCGGTCTCTGATTCGCTTGGTGCAGCGTCGGGAACTGATTCGGCGATTTGATTGCGCACGCTGGCTGGACATGACTGGTTGTTATGGAAAAAGAAAAG
GAAGGAAACAGGAAAAAACAAAGAATAGCGAATTGGATCCCGCCTTGCATCAACTGAATCGGAGGCCGCG

dot-bracket secondary structure
)..(((((((((((((((.(((((((((.(.(((((.(((((((.(((.........)))..((((.((........(((.((.((...............
)).))...)))..........))..))))))))))).)))))).))))))))).))))))))))))))).


SIMILARITIES
miRBase ptc-MIR168a: 3.0E-21

PMRD pts-miR168b: 3.0E-21

microPC miR168: 2.0E-15		UniProt no hits

RFAM 8MIR168: 2.0E-22		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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