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ABOUT THIS RECORD

ID: MNEST002212
species: Populus tremula x Populus tremuloides
miRNA family: MIRf99
source: miRNEST

Taxonomy by NCBI:
Populus tremula x Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAACCGGACCGAACCGGAAAT

miRNA*
AATCGGTTTGGTTAGTTTTT

mismatches: 5
bulges: 1

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pre-miRNA
AAATAAATAAATAAATCGGTTTGGTTAGTTTTTTGGGTGAAAACCGGACCGAACCGGAAATGCTCACCCCT

dot-bracket secondary structure
...............(((((((((((.((((((.....))))))..)))))))))))..............


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11566-akr: 0.00000000005

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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