ABOUT THIS RECORDspecies: Populus tremuloides
miRNA family: MIRf904
source: miRNEST
Taxonomy by NCBI:
Populus tremuloides Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTGGACTTGCTGCTGGAGAG miRNA* TTTCCATTACAAGGTTCACACA mismatches: 5 bulges: 1 |
pre-miRNA
AGAAGCCATCCTTTTCCATTACAAGGTTCACACATTATTCCTGAAGCAACCTTCATTACAACTGCTGCTGTTCTTCTTGGACTTGCTGCTGGAGAGGAGG
GCTGC
dot-bracket secondary structure
...((((.((((((.(((.((..(((((((..............((((..............))))...........)))))))..)).))))))))).)
)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
AGAAGCCATCCTTTTCCATTACAAGGTTCACACATTATTCCTGAAGCAACCTTCATTACAACTGCTGCTGTTCTTCTTGGACTTGCTGCTGGAGAGGAGG
GCTGC
dot-bracket secondary structure
...((((.((((((.(((.((..(((((((..............((((..............))))...........)))))))..)).))))))))).)
)))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
