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ABOUT THIS RECORD

ID: MNEST002252
species: Prunus persica
miRNA family: MIR171
source: miRNEST

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATTGAGCCGTGCCAATATC

miRNA*
 TGTTGGCGTGGCTCAATCAAA

mismatches: 0
bulges: 0
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pre-miRNA
 AGTTGTAGCATTTTGGTGGAATGATGATGTTGATGTTGGCGTGGCTCAATCAAATCAAACTTCTCAACTGTTTATTGGGTCCTTTAATTTGATTGAGCCG
TGCCAATATCATTATCAGTCTCCAAAAACTCATCAACCAA

dot-bracket secondary structure
.((((.((..((((((.(((....(((((.(((((((((((((((((((((((((.(((...(((((.......)))))...))).))))))))))))))
))))))))))).))))).))))))))).))...))))...


SIMILARITIES
miRBase vvi-MIR171i: 0.000000000000008

PMRD ppe-miR171: 5e-50

microPC miR171: 2e-43		UniProt no hits

RFAM MIR171_1: 0.0000000000001		most similar mature miRNAs

Identical with: ppe-miR170 from PMRD (MNEST051345)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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