ABOUT THIS RECORDspecies: Prunus persica
miRNA family: miR3629a
source: miRNEST
Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCATTTTCTCAGCAGCCAAA miRNA* TGGTCGCTGAGAAAAACTAAA mismatches: 5 bulges: 0 |
pre-miRNA
TTTGGTCGCTGAGAAAAACTAAACTAATACACTTGAACAAAGTTATTTCTTCCCATGCGCATTTTCTCAGCAGCCAAACAAACTAAA
dot-bracket secondary structure
((((((.((((((((((........((((.((((.....))))))))..............)))))))))).)))))).........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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TTTGGTCGCTGAGAAAAACTAAACTAATACACTTGAACAAAGTTATTTCTTCCCATGCGCATTTTCTCAGCAGCCAAACAAACTAAA
dot-bracket secondary structure
((((((.((((((((((........((((.((((.....))))))))..............)))))))))).)))))).........
SIMILARITIES| miRBase vvi-MIR3629c: 0.00006 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
