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ABOUT THIS RECORD
ID:
MNEST002272
species:
Pseudoroegneria spicata
miRNA family:
MIRf34
source:
miRNEST
Taxonomy by NCBI:
Pseudoroegneria spicata
Pseudoroegneria
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATGGGATGGAGGGAGTACAA
miRNA*
TTACTTCCTTCGTCTCAATTG
mismatches:
5
bulges:
0
View larger
pre-miRNA
CATACTTAAAAG
TTACTTCCTTCGTCTCAATTG
CTAGATACAATCGTTTGAGCGTCAATTAA
CATGGGATGGAGGGAGTACAA
AGCTAGAAC
dot-bracket secondary structure
............
.((((((((((((((((..((
((....((....))...))))........
..))))))))))))))))...
.........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record