miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002272
species: Pseudoroegneria spicata
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CATGGGATGGAGGGAGTACAA

miRNA*
TTACTTCCTTCGTCTCAATTG

mismatches: 5
bulges: 0

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pre-miRNA
CATACTTAAAAGTTACTTCCTTCGTCTCAATTGCTAGATACAATCGTTTGAGCGTCAATTAACATGGGATGGAGGGAGTACAAAGCTAGAAC

dot-bracket secondary structure
.............((((((((((((((((..((((....((....))...))))..........))))))))))))))))............


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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