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ABOUT THIS RECORD

ID: MNEST002276
species: Pseudoroegneria spicata
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Pseudoroegneria spicata Pseudoroegneria Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTACTCCCTCCGTTCCTAAAT

miRNA*
TTAGGAACAGAGGGAGTAGTT

mismatches: 1
bulges: 0

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pre-miRNA
GGAGAGAATTATTACTCCCTCCGTTCCTAAATATAAGACCTTTTAGAGATTACACTGTAGATTACAAACGGAGCAAAATAAGTGAATCTACACTATAAAG
TATGTCTATATACATCCGCCGTATGTAGTCCATAGTGAAATATCTAAAAGGTTTTATATTTAGGAACAGAGGGAGTAGTTAGGAAAGT


dot-bracket secondary structure
..........(((((((((((.(((((((((((((((((((((((((.(((.((((((.(((((((.((((.......((.(((.((.(((........)
)).)).))).))......)))).))))))).)))))).))).))))))))))))))))))))))))).))))))))))).........



SIMILARITIES
miRBase tae-MIR1122: 4e-17

PMRD tae-miR1122: 4e-17

microPC miR1436: 7e-16
UniProt no hits

RFAM MIR1122: 2e-31
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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