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ABOUT THIS RECORD

ID: MNEST002319
species: Quercus robur
miRNA family: miR3948
source: miRNEST

Taxonomy by NCBI:
Quercus robur Quercus Fagaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGGAGTGGGAGTGGGAGTGGG

miRNA*
 CACTCCCACTTTACCTCACCAA

mismatches: 3
bulges: 1
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pre-miRNA
 AAAATGAAAATGGGAGTGGGAGTGGGAGTGGGTCTACATCAACATCACAATGATAAAGAGCTCAAGGCCTCAGACGCTTTGCCACTCCCACTTTACCTCA
CCAATGCTGTCT

dot-bracket secondary structure
..........((((((..(((((((((((((.(((..((((.........))))..)))...((((((.......)))))))))))))))))))..))).
))).........


SIMILARITIES
miRBase cre-MIR1171: 0.00008

PMRD cre-miR1171: 0.00008

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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