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ABOUT THIS RECORD

ID: MNEST002339
species: Raphanus raphanistrum
miRNA family: miR168b
source: miRNEST

Taxonomy by NCBI:
Raphanus raphanistrum Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCCGCCTTGTATCAAGTGAAT

miRNA*
TCGCTTGGTGCAGGTCGGGAA

mismatches: 1
bulges: 0

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pre-miRNA
AATATGTTGCGGCGGCCTCTGATTCGCTTGGTGCAGGTCGGGAACTGATTGGCTGACACAGCCACGTGGGTTTTCATGGTTGGCTCGTGAGCAGGGATCG
GATCCCGCCTTGTATCAAGTGAATCCGAGTCCGACGTGAAAGAT


dot-bracket secondary structure
......(((((.(((.(((.(((((((((((((((((.(((((.((((((.(((..(((((((.(((((....)))))...)))).))))))...)))))
).))))).))))))))))))))))).))).))).))))).....



SIMILARITIES
miRBase bna-MIR168: 9e-58

PMRD bna-miR168: 9e-58

microPC miR168: 0.000000000002
UniProt no hits

RFAM MIR168: 3e-27
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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