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ABOUT THIS RECORD

ID: MNEST002343
species: Raphanus raphanistrum
miRNA family: MIR437
source: miRNEST

Taxonomy by NCBI:
Raphanus raphanistrum Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAAGTCAGAGAAGTTTGATGA

miRNA*
GTTTAATTTCATTGATTTTTG

mismatches: 2
bulges: 0

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pre-miRNA
TGGCTCAAGGGGACGTCCTGTGCAGAAACCTAAGATCGAAATCACGCTTGGGAAGTCAGAGAAGTTTGATGAACTAATGGCTGCAGCCAATGAAGAAAAA
GAAGCTGCAGATGCTCAAGTCCAGAGCTGAACATAGCCCTTCTTATGTTATGGTTTCATGGGTCTTTCTTCTGTCTTGATGCTTTATATTATTTGTTTAA
TTTCATTGATTTTTG
GCTGAATTTGAGTTTGTTATGTTTTGGATGGTTTGTTGTACCTGTTGA


dot-bracket secondary structure
.((..(((.(((.(((((...(((..(((..(((.(((((.(((.(((..(((((((((.((((((.((((((.(((((.(((((((.............
...)))))))..(((((((..(((((..((.(((((((.............))))..)))..))....))))).))))).))....))))))))))).))
)))).))))))))))
))))).))))).)))))).)))...))))).))).)))..))......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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