miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST002379
species:
Raphanus raphanistrum subsp. maritimus
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Raphanus raphanistrum subsp. maritimus
Raphanus raphanistrum
Raphanus
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGTCGTCATCATCATCATCA
miRNA*
GTGAGGATGAGATTTGGGA
mismatches:
2
bulges:
2
View larger
pre-miRNA
CAGATTCTG
GTGAGGATGAGATTTGGGA
AGATTGTGGAAGGCTTGAAGTCCAAGATAAAGGCAAGTCTAAGGATGCGGAAGAGATCCTCATTATCATCAT
CGTCA
TCGTCGTCATCATCATCATCA
TCATCA
dot-bracket secondary structure
..(((..((
((((.((((((((.(((((
.(((.((((.(((((((................)))))))...((((.(((.....))).)))).)))).))
).)).
)))..))).))))).))))))
..))).
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-598: 0.0000005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record