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ABOUT THIS RECORD
ID:
MNEST002394
species:
Raphanus sativus
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Raphanus sativus
Raphanus
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCGTCATCATCATCATTT
miRNA*
ATGATGGTACATGAACAATGGCA
mismatches:
3
bulges:
2
View larger
pre-miRNA
AAAAACAAAAAA
ATGATGGTACATGAACAATGGCA
ACATCCTAATCACTTTACAGACATTACCCTACCTCTCCTTGTTGTTTGGTTAAAGACACAA
TCAT
CGTCATCATCATCATTT
TGTGTGTTTCTCTCTTCCA
dot-bracket secondary structure
..(((((..(((
((((((((..((((...((((..
...((.((((((....((((.....................)))).))))))..)).....
))))
..)))).))))))))))
)...)))))..........
SIMILARITIES
miRBase
ath-MIR414
:
0.0004
PMRD
ghr-miR414d
:
0.0004
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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