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ABOUT THIS RECORD

ID: MNEST002407
species: Raphanus sativus
miRNA family: miR162
source: miRNEST

Taxonomy by NCBI:
Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGGAGGCAGCGGTTCATCGAT

miRNA*
CGATAAACCTCTGCATCCAGC

mismatches: 3
bulges: 0

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pre-miRNA
GTGACAGTTGCTGGAGGCAGCGGTTCATCGATCTCTTCCTGAGAATTTTTTTTTTGGAAAGAAAGGAAGATAAAAATTAAAAGCATGAACAGATCGATAA
ACCTCTGCATCCAGC
GGTTTACC


dot-bracket secondary structure
((((...((((((((.((((.((((.((((((((.(((.((..(((((((.((((...........)))).))))))).....)).))).)))))))).)
))).)))).))))))
)).)))).



SIMILARITIES
miRBase ghr-MIR162a: 0.0000000000004

PMRD ghr-miR162a: 0.0000000000004

microPC miR162: 0.0000000000004
UniProt no hits

RFAM MIR162_2: 0.00000000000003
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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