miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002415
species: Raphanus sativus
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Raphanus sativus Raphanus Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGATCATCATCATCATCTTGA

miRNA*
AAGATGATGATGATGATGACG

mismatches: 4
bulges: 0

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pre-miRNA
TGGATGAAGACGAAGAAGATGATGATGATGATGACGATGATTTGGACATGGATGAGCTCGATGAACTGGAAGCAAGCTTGTCGAAGACATCCATCCAGAT
TCGTGAGCAAGGATCATCATCATCATCTTGAGATGAAAAACAT


dot-bracket secondary structure
...............(((((((((((((((((.((((..(((((((..((((((...(((((((.((.......)).)))))))...)))))))))))))
))))........)))))))))))))))))..............



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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