miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST002466
species: Saccharum officinarum
miRNA family: MIR1848
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TCTCGCTGGCGCGCGCGTGCG

miRNA*
CGCGCGGTCCCATCGAAGG

mismatches: 2
bulges: 2

View larger

pre-miRNA
GCATGGGGGCCTCTCGCTGGCGCGCGCGTGCGGTACAGGTGCGCGCGGTCCCATCGAAGGCTCCCGGG

dot-bracket secondary structure
...(((((((((.(((.(((.((.((((((((.......)))))))))).))).))))))))))))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record