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ABOUT THIS RECORD

ID: MNEST002470
species: Saccharum officinarum
miRNA family: MIRf75
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCGAGACGAATCTTTTAAGC

miRNA*
 TTAATAAATTCGTCTTACGGT

mismatches: 5
bulges: 0
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pre-miRNA
 ATGTGCATGGAGCATTAAATATAGATAAAAAAATAACTAATTGCACATTTTGCATGAATTTTGCGAGACGAATCTTTTAAGCCTAATTAGTCCATGATTA
ACCATAATTGCTACAGTAACACACATATGCTAATGACGGATTAATTAGACTTAATAAATTCGTCTTACGGTTTCCAGGCGAGTTATGTAATTAGTTTTTT
TTATTAGTATGCGAACGCCTCTTTCGACA

dot-bracket secondary structure
..((((.....))))...((((.((((((((((..((((((((((...(((((..(((..(((.(((((((((...(((((.(((((((((((.((((((
....))))))...((.((.((......)).)).))..))))))))))).)))))...))))))))).))).)))...)))))...)))))))))))))))
))))).)))).((((.......))))...


SIMILARITIES
miRBase osa-MIR442: 2e-16

PMRD osa-miRf10240-akr: 4e-27

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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