miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST002471
species: Saccharum officinarum
miRNA family: MIRf88
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CATCTTTAGCCCCGATTGGAA

miRNA*
 CCACTTGGGACTAGAGATCTT

mismatches: 5
bulges: 0
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pre-miRNA
 AAACGCCGGGAGCCTTTAGTCCCGGTGGAGCCACGACCGGNGACTAAAGGACATCTTTAGCCCCGATTGGAACCACCACTTGGGACTAGAGATCTTTAAT
CCCAGGCTCTTTATATTTGTCTTGTGATGTGC

dot-bracket secondary structure
....(((((((.((((((((((((((.........))))).)))))))))..((((((((.(((((.(((.....))).))))).))))))))......)
))).)))....((((((........)))))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
Source sequences
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