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ABOUT THIS RECORD
ID:
MNEST002505
species:
Saccharum officinarum
miRNA family:
MIRf88
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCGGTTGGTAACACCAACC
miRNA*
TTGGTGTATCAACCGGGACT
mismatches:
0
bulges:
1
View larger
pre-miRNA
GTTTTAA
TCCCGGTTGGTAACACCAACC
GAGACTAAACTCAGTCCTATAGTCCCGGTCGGTGCCACGGACCGGGACAAAAGCTGTAGTCCCGGTCTGTGG
AACCGACTGGGACTAAAGGTAGGGCTTTAGTCCCGG
TTGGTGTATCAACCGGGACT
AAAG
dot-bracket secondary structure
..((((.
((((((((((((.((((((((
(.(((((((.((...(((.((((((((((((((.((((((((((((((..........))))))))))))))
.)))))))))))))).)))...)).))))))).)))
)))))))))))))))))).)
))).
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11934-akr
:
0.0000000000006
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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