miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002505
species: Saccharum officinarum
miRNA family: MIRf88
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCCGGTTGGTAACACCAACC

miRNA*
TTGGTGTATCAACCGGGACT

mismatches: 0
bulges: 1

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pre-miRNA
GTTTTAATCCCGGTTGGTAACACCAACCGAGACTAAACTCAGTCCTATAGTCCCGGTCGGTGCCACGGACCGGGACAAAAGCTGTAGTCCCGGTCTGTGG
AACCGACTGGGACTAAAGGTAGGGCTTTAGTCCCGGTTGGTGTATCAACCGGGACTAAAG


dot-bracket secondary structure
..((((.((((((((((((.(((((((((.(((((((.((...(((.((((((((((((((.((((((((((((((..........))))))))))))))
.)))))))))))))).)))...)).))))))).))))))))))))))))))))).)))).



SIMILARITIES
miRBase no hits

PMRD osa-miRf11934-akr: 0.0000000000006

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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