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ABOUT THIS RECORD
ID:
MNEST002520
species:
Saccharum officinarum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCATCCCAAATT
miRNA*
TTTGAGATGGAGGGAGTAAAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
TTTAGATTCTTGGGCTGTGACGTCACACACAC
ATACTCCCTCCATCCCAAATT
ATAAGGCACTCCAAGAATCTTGGAATGACTTATAA
TTTGAGATGGAG
GGAGTAAAT
GAATGATGACTCCTTATGATGAGAAACAA
dot-bracket secondary structure
......((((((...(((((.((((((..((.
.(((((((((((((.((((((
(((((.((.((((((...)))))).)).)))))))
)))).)))))))
))))))..)
)..)).))))...))))).))))))....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.000000000000002
most similar mature miRNAs
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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