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ABOUT THIS RECORD

ID: MNEST002521
species: Saccharum officinarum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCCCTCCATCCCAAATT

miRNA*
 TTTGGAATAAAGGGAGTACAA

mismatches: 4
bulges: 0
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pre-miRNA
 TATAATTGTTTATACTCCCTCCATCCCAAATTATAAGACGTTTGACTTTTTTACCTCAAGTTTGACCACTCGTCTTATTCAAAAAATTTGTACAAATATA
GTCAAATTTAAGTCATTCTTAAAGAACTTTTATTAATATACCAAGCTACGATAAAAAATTGATATTTTGCACAATTTTTTTGAATAAGATGAGTGGTCAA
ACTTGGTGGCAAAAAAGTCAAAAGTCTTATAATTTGGAATAAAGGGAGTACAAAGCAAGCC

dot-bracket secondary structure
.....((((((.((((((((..((.((((((((((((((.((((((((((((.(((((((((((((((((((((((((((((((((.((((.((((....
(((((.((((((.....))))))....(((((((...............)))))))..)))))..)))).)))).)))))))))))))))))))))))))
)))))).)).)))))))))))).)))))))))))))).))..))))))))..))))))...


SIMILARITIES
miRBase osa-MIR818e: 0.00000000000006

PMRD osa-miR818e: 0.00000000000006

microPC miR806: 0.0000002		UniProt no hits

RFAM MIR806: 5e-52		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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