ABOUT THIS RECORDspecies: Saccharum officinarum
miRNA family: MIRf1339
source: miRNEST
Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCTCGTTATCTTAACGAG miRNA* CGTCAGGATAACGAGCCAG mismatches: 4 bulges: 0 |
pre-miRNA
GATCGTCAGGATAACGAGCCAGCTCGGTTCGGCTCGTTATCTTAACGAG
dot-bracket secondary structure
..((((.(((((((((((((..........))))))))))))).)))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATCGTCAGGATAACGAGCCAGCTCGGTTCGGCTCGTTATCTTAACGAG
dot-bracket secondary structure
..((((.(((((((((((((..........))))))))))))).)))).
SIMILARITIES| miRBase no hits PMRD osa-miRf11845-akr: 0.00000000003 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
