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ABOUT THIS RECORD
ID:
MNEST002529
species:
Saccharum officinarum
miRNA family:
MIRf89
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGTTCGTGTTACAAACCGGC
miRNA*
CGGTTTGTGTTACAAACCGGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
CAGTTATGCCAAACCGGCAGTGATAACTCATGTATCACTGC
CGGTTCGTGTTACAAACCGGC
AGTGATACTTGAGCAATCACTGC
CGGTTTGTGTTACAA
ACCGGC
AGTGATACTTGAGCCATCACTGCCGGTTGTTTTAACCA
dot-bracket secondary structure
..((((.....(((((((((((((..((((.((((((((((
(((((.(((.(((((((((((
((((((.........))))))))
))))))))).))).)
))))))
)))))))).))))..)))))))))))))....))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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