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ABOUT THIS RECORD

ID: MNEST002555
species: Saccharum officinarum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCCCTAAAAA

miRNA*
 TTCAAGGAGGGAGGGAGTAGT

mismatches: 4
bulges: 0
View larger
pre-miRNA
 TAAAATGTCATCTACTCCCTCCGTCCCTAAAAAAACGTCACTCTGGTTTTGTCCTAAGTCAAACAATATCAAATTTGACCAATCATACCTAAAATATTAT
AAATACTTATGATACCAAATAAGTATATTTGGATTCACCATGAGACATATTTTCATTGTATATCTATTCGGTGTCATAAATGTTGATATTCTTCTCTATA
ATTTTTTGTCAAACTTGACATAGTTTGACTTAGGACAAAACTAGGGTGACATTTTTTCAAGGAGGGAGGGAGTAGTAGCATTCCC

dot-bracket secondary structure
...(((((...(((((((((((.(((...((((((.((((((((((((((((((((((((((((.((.((((.((((((.((..........((((((..
.((((.((((((((((.((((.((((((.(((.....)))(((((.....)))))..)))))).)))).)))))))))).))))))))))..........
....)).)))))).)))).)).)))))))))))))))))))))))))))).))))))...))).)))))))))))..)))))...


SIMILARITIES
miRBase far-MIR437: 0.00001

PMRD osa-miR437: 0.00006

microPC miR1435: 0.001		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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