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ABOUT THIS RECORD

ID: MNEST002583
species: Saccharum officinarum
miRNA family: MIR437
source: miRNEST

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGAAATTTGACTTAGGACAAA

miRNA*
 TATGCCAAGTCAAACATCTTT

mismatches: 4
bulges: 2
View larger
pre-miRNA
 ACTACTGAAGTTACTTACTCCCTTTGTTCCAAATTATAGTTCACTTTGGCTTTATGCCAAGTCAAACATCTTTTAAGTTCGACCAAGTTTATAGAAAAAG
CCACCAACATCCACAAGATCAAATTAGTTTTATTAAATTATCCATGGAATATGTTTTCATAAACTGTAGATGTTACTATATATTTTTTTTTCTAAAAACT
TGGTCTTTAGGGAAATTTGACTTAGGACAAACCTAAAGGGAACTATATTTTGGAATGGAGAGAGAGTATATTGTAAGTTA

dot-bracket secondary structure
.......((.((((.(((((.((((((((((((.((((((((.((((((.(((...((((((((((..(((((.......((((((((((.(((((((((
.....((((((.(((.(((.((.(((((...))))).))))).((((((.....))))))....))).))))))...........))))))))).)))))
)))))...)))))..)))))))).))..))).)))))).)))))))).))))))))))))...)))))....)))).)).


SIMILARITIES
miRBase bdi-MIR5169: 0.00000002

PMRD zma-miR437e: 0.0000009

microPC miR437: 0.00000006		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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