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ABOUT THIS RECORD
ID:
MNEST002586
species:
Saccharum officinarum
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTACTCCCTCCGTTCCAAATT
miRNA*
TTTGGAATGGAGGGAGTAGCG
mismatches:
0
bulges:
0
View larger
pre-miRNA
ATACTGCAGTG
TTACTCCCTCCGTTCCAAATT
ATAAGACGTTTTATTTTTTTCTAGATATATTGCTTTTACTTTGTATCTAGACATAATATATATCTAAG
CGCATAGTAAAGTCTACGTATCTAGAAAAGCCATAACATTTTTATAA
TTTGGAATGGAGGGAGTAGCG
TTTTTTTT
dot-bracket secondary structure
.........((
(((((((((((((((((((((
((((((.(((.....(((((((((((((.....(((((((.(((...((((.(((...))).))))..
.))).))))))).....)))))))))))))....)))..))))))))
)))))))))))))))))))))
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
miR1439
:
0.0001
UniProt
no hits
RFAM
MIR1122: 0.0000000002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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