ABOUT THIS RECORDspecies: Saruma henryi
miRNA family: MIR2673
source: miRNEST
Taxonomy by NCBI:
Saruma henryi Saruma Aristolochiaceae Piperales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTCTTCCTCTTCCTCGTCCT miRNA* GCGAGGAGGAGGATTCTGCC mismatches: 5 bulges: 1 |
pre-miRNA
CTCCCTCTCCTTCTCTTCCTCTTCCTCGTCCTCGTCCTCGTCCACGCCGGAGTATCGGAGGAGCCGGTACTCGAGCTTCTCTTCCAAAGGCGAGGAGGAG
GATTCTGCCCCCATCGA
dot-bracket secondary structure
................((((((((((((.(((.............((..(((((((((.....)))))))))..))...........)))))))))))))
))...............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
CTCCCTCTCCTTCTCTTCCTCTTCCTCGTCCTCGTCCTCGTCCACGCCGGAGTATCGGAGGAGCCGGTACTCGAGCTTCTCTTCCAAAGGCGAGGAGGAG
GATTCTGCCCCCATCGA
dot-bracket secondary structure
................((((((((((((.(((.............((..(((((((((.....)))))))))..))...........)))))))))))))
))...............
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
