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ABOUT THIS RECORD
ID:
MNEST002623
species:
Selaginella moellendorffii
miRNA family:
MIR536
source:
miRNEST
SEQUENCE & STRUCTURE
miRNA
TCGTGTCAAGCTGTGTGCATC
miRNA*
TGCACTCAGCTTGACACGGCC
mismatches:
1
bulges:
0
View larger
pre-miRNA
TGCTATACATCGTCGAGCGCTGTGTTTTTGA
TGCACTCAGCTTGACACGGCC
GTGCTTGGAAGTCTGGAAAGTTTTCTTTCACGCTCCACTGATGCTGCT
GCTGCAATGCGTGCTGACTCTCTCTCTCTCTCTTGG
TCGTGTCAAGCTGTGTGCATC
ACAACGCATTGCTCGTTTTCAAGATTTC
dot-bracket secondary structure
........(((..((((((.((((((..(((
(((((.(((((((((((((((
(.....((.((...(((.((((......(((((.....((..((....
))..))..)))))..)))).)))..)).))...)))
))))))))))))).)))))))
).)))))).)))))).......)))...
SIMILARITIES
miRBase
smo-MIR536
:
4e-57
PMRD
smo-miR536
:
4e-57
microPC
miR536
:
2e-43
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record
deep sequencing data evidence