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ABOUT THIS RECORD

ID: MNEST002682
species: Sorghum propinquum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Sorghum propinquum Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAATACTCCCTCCGTCCCCGA

miRNA*
 GGGGACGGAGGGAGTAGGGTT

mismatches: 2
bulges: 0
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pre-miRNA
 CTGGACTTCAGCAATACTCCCTCCGTCCCCGAAAAAATCAATTCCTAGAATCCGTGCCAGTCAAACTTTTTAAAGTTTGACTAACTTTATAGAAAAGAGT
AACAACATCTATAATATAAAATGCACATTATATGAAAATATATTCTATGATGAATCTAATAATACTAATTTGATACTATAAATTTTAGCATTTTTTCTAG
AAATTTGGTCAAAGTTTAAAAAGTTTGACTTAGGACAACTCTAGAAATTGACTCTTTCGGGGACGGAGGGAGTAGGGTTGAAAGCAG

dot-bracket secondary structure
......((((((..((((((((((((((((((((...((((((.(((((.(((.....((((((((((((((((.(((((((((.(((.(((((((((..
...((.((.((((.(((.((((...(((((((.(((......))))))))))...............)))).))).)))).)).))....))))))))).
))).))))))))).))))))))))))))))..)))....))))).))))))...))))))))))))))))))))..)))))).....


SIMILARITIES
miRBase osa-MIR437: 0.00000006

PMRD osa-miR437: 0.00000006

microPC miR1436: 0.0002		UniProt no hits

RFAM MIR1122: 0.0003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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