miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST002752
species: Trifolium pratense
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCCGTCCCAAAATATAAGCA

miRNA*
 CTTATATTTTGGGACGGAGTA

mismatches: 0
bulges: 0
View larger
pre-miRNA
 ACTTCTGTGCGAAGTACTCCCTCCGTCCCAAAATATAAGCAAAAATTGGTCAATGAAAGTTGATGTATTTGGTTTAAAATTTAGTCCAGATACATTCACT
TTTGTTGACCTCCTTTTGCTTATATTTTGGGACGGAGTAGTATGTCGTATGAAGA

dot-bracket secondary structure
.((((.((((((.(((((..((((((((((((((((((((((((...(((((((((((((.(((((((((((.((((...)))).))))))))))).)))
))))))))))...)))))))))))))))))))))))).))))).)))))))))).


SIMILARITIES
miRBase osa-MIR818d: 0.000008

PMRD osa-miRf10603-akr: 0.000000008

microPC miR1439: 0.0000005		UniProt no hits

RFAM MIR1122: 2e-25		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;