miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002760
species: Trifolium pratense
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Trifolium pratense Trifolium Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCATCATCATCATCATCATTA

miRNA*
 GTGGTGGAGAGAGCGATGAGG

mismatches: 3
bulges: 2
View larger
pre-miRNA
 CGGGTTACGGTGGTGGTGGAGAGAGCGATGAGGAGAATGACGGCGGCGATTGGGAGACGGAGGAGGAGAGAAGCCATGGCGGAGAGAGCGGCGGAGAGAG
CGGCGGAGAGATTGAAATTGGAAGAGGTCCGAGGATTCCCGAATAGGTCAACCTTTCGAACTGCTGCCACGAGCAGGCAAGAGACAACCTGGCGAACTGA
AACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATCCTCGTGCCGAATTCCTGCAGCCCGGGGGATCCACTAGTTCTAGAGCGGCCGCCACCGCGT
CAAGTTCATCTTCAACCTCTTGCTTCTTCTCTCCAGCATCATCATCATCATCATTATCATCATCC

dot-bracket secondary structure
.((((...(((((((((((.((((..((((.(((((..((.((.(((((..((......(((((.(((.((.((..((((((.....((.((((.(((..
((((((((.(((((...(((.......(((.(((....((.....))....)))(((...(((((......)))))....))).....(((((..(((((
......))))).))))).)))........)))...)))))))).)))))..))))))).))(((.(((((......)))))....)))))))))..)).)
)...))).)))))..))..))))).)))))))))..)))).)).)).)))))))))))...))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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