ABOUT THIS RECORDspecies: Triphysaria pusilla
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCCCTCCGTCCCAAAATGA miRNA* ATTTTGGGACGGAGACCATTT mismatches: 5 bulges: 0 |
pre-miRNA
TCCAGATTTTGTACTCCCTCCGTCCCAAAATGATTGCAATCATTTTGGGACGGAGACCATTTTGGGACGG
dot-bracket secondary structure
((((((...((......(((((((((((((((((....)))))))))))))))))..)).))))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TCCAGATTTTGTACTCCCTCCGTCCCAAAATGATTGCAATCATTTTGGGACGGAGACCATTTTGGGACGG
dot-bracket secondary structure
((((((...((......(((((((((((((((((....)))))))))))))))))..)).))))))....
SIMILARITIES| miRBase tae-MIR1137: 0.0002 PMRD tmo-miR1122: 0.0000002 microPC miR1439: 0.00005 | UniProt no hits RFAM MIR1122: 0.00001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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