ABOUT THIS RECORDspecies: Triphysaria pusilla
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTACTCCCTCCGTCCCAAA miRNA* TGGGACCGAGGGAGTATTATA mismatches: 3 bulges: 0 |
pre-miRNA
AAATGATTATGTTTTACTCCCTCCGTCCCAAAATGATTTTCCACTTTGCTATTAAATTTTATAGCAAAGTAGACAATCATTTTGGGACCGAGGGAGTATT
ATATATGGAAT
dot-bracket secondary structure
.......(((((..(((((((((.((((((((((((((.((.((((((((((........)))))))))).)).)))))))))))))).)))))))))..
)))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAATGATTATGTTTTACTCCCTCCGTCCCAAAATGATTTTCCACTTTGCTATTAAATTTTATAGCAAAGTAGACAATCATTTTGGGACCGAGGGAGTATT
ATATATGGAAT
dot-bracket secondary structure
.......(((((..(((((((((.((((((((((((((.((.((((((((((........)))))))))).)).)))))))))))))).)))))))))..
)))))......
SIMILARITIES| miRBase tae-MIR1122: 0.0003 PMRD osa-miRf10569-akr: 0.00008 microPC miR1439: 0.0003 | UniProt no hits RFAM MIR1122: 0.0004 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
