ABOUT THIS RECORDspecies: Triticum monococcum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCCCTCCGTTCCATAATAT miRNA* ATTATGGGACGGAGAGGTAG mismatches: 1 bulges: 1 |
pre-miRNA
CATTGTGAACTACTCCCTCCGTTCCATAATATAAGATGGTTTTGCAAGCAGTTTTAGCTTATATTATGGGACGGAGAGGTAGTATATTGC
dot-bracket secondary structure
....(((.((((((..(((((((((((((((((((.(((..(((....)))..))).))))))))))))))))))).)))))).)))...
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CATTGTGAACTACTCCCTCCGTTCCATAATATAAGATGGTTTTGCAAGCAGTTTTAGCTTATATTATGGGACGGAGAGGTAGTATATTGC
dot-bracket secondary structure
....(((.((((((..(((((((((((((((((((.(((..(((....)))..))).))))))))))))))))))).)))))).)))...
SIMILARITIES| miRBase tae-MIR1120: 0.00002 PMRD osa-miRf12035-akr: 0.00000007 microPC miR1436: 0.00000007 | UniProt no hits RFAM MIR1122: 0.0000003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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