ABOUT THIS RECORDspecies: Triticum monococcum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCTGTAAACTAATATAAAAG miRNA* CTTTTATTAGTTTACAGAGAG mismatches: 2 bulges: 0 |
pre-miRNA
ACTTCTACTCTCTCTGTAAACTAATATAAAAGCGTTTAAATTACTATCTAAACACTCTTTTATTAGTTTACAGAGAGAGTACGTA
dot-bracket secondary structure
.....(((((((((((((((((((((.((.((.(((((..........))))).)).)).)))))))))))))))))))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACTTCTACTCTCTCTGTAAACTAATATAAAAGCGTTTAAATTACTATCTAAACACTCTTTTATTAGTTTACAGAGAGAGTACGTA
dot-bracket secondary structure
.....(((((((((((((((((((((.((.((.(((((..........))))).)).)).)))))))))))))))))))))....
SIMILARITIES| miRBase no hits PMRD tur-miR1120: 0.0002 microPC no hits | UniProt no hits RFAM MIR1122: 0.00000000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
