ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTACTCCCTTCGTCCCACAGT miRNA* TGTGGGACGGAGGGAGTAGTT mismatches: 0 bulges: 0 |
pre-miRNA
GTGGACGCGATCTTGTAAATATTACTCCCTTCGTCCCACAGTATAACTTGAAAAAGGATCTTATATTGTGGGACGGAGGGAGTAGTTGCAAATATCAGTA
TGTCG
dot-bracket secondary structure
...((((.(((.(((((...(((((((((((((((((((((((((((((....)))....)))))))))))))))))))))))))))))))..)))....
)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GTGGACGCGATCTTGTAAATATTACTCCCTTCGTCCCACAGTATAACTTGAAAAAGGATCTTATATTGTGGGACGGAGGGAGTAGTTGCAAATATCAGTA
TGTCG
dot-bracket secondary structure
...((((.(((.(((((...(((((((((((((((((((((((((((((....)))....)))))))))))))))))))))))))))))))..)))....
)))).
SIMILARITIES| miRBase tae-MIR1120: 0.00002 PMRD osa-miRf11705-akr: 0.0000003 microPC miR1439: 0.00002 | UniProt no hits RFAM MIR1122: 0.00000002 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
