ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIR1171
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGAGTGGAGTGGACTGGAGT miRNA* TTTTTACTACTGTACTCTACT mismatches: 4 bulges: 0 |
pre-miRNA
CACGGCGTGATGCTCAGCCAGTGGAGTGGAGTGGACTGGAGTCCTACTTTTTACTACTGTACTCTACTAGGTGTGGAGTGNANTGG
dot-bracket secondary structure
(((...)))..((((.((((((((((((.(((((...(((((...)))))...))))).))))))))).)))...)))).......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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CACGGCGTGATGCTCAGCCAGTGGAGTGGAGTGGACTGGAGTCCTACTTTTTACTACTGTACTCTACTAGGTGTGGAGTGNANTGG
dot-bracket secondary structure
(((...)))..((((.((((((((((((.(((((...(((((...)))))...))))).))))))))).)))...)))).......
SIMILARITIES| miRBase cre-MIR1171: 0.001 PMRD cre-miR1171: 0.001 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
