ABOUT THIS RECORDspecies: Triticum turgidum subsp. durum
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCCTCTGTAAAGAAATATAA miRNA* ATATTTCTTTACAGAAGGAGT mismatches: 1 bulges: 0 |
pre-miRNA
AATCTAGCTTCTAAAAGGTACTCCCTCTGTAAAGAAATATAAAAGCGTTTATTAGATCACTGAAGTAGTGATCTAAATGTTCTTATATTTCTTTACAGAA
GGAGTAACTTGCTAGATGGCATG
dot-bracket secondary structure
.(((((((......(((.((((((.(((((((((((((((((.((((((...((((((((((...)))))))))))))))).))))))))))))))))).
)))))).))))))))))......
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AATCTAGCTTCTAAAAGGTACTCCCTCTGTAAAGAAATATAAAAGCGTTTATTAGATCACTGAAGTAGTGATCTAAATGTTCTTATATTTCTTTACAGAA
GGAGTAACTTGCTAGATGGCATG
dot-bracket secondary structure
.(((((((......(((.((((((.(((((((((((((((((.((((((...((((((((((...)))))))))))))))).))))))))))))))))).
)))))).))))))))))......
SIMILARITIES| miRBase tae-MIR1121: 7e-18 PMRD tae-miR1121: 7e-18 microPC miR1121: 0.00002 | UniProt no hits RFAM MIR1122: 2e-21 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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