ABOUT THIS RECORDspecies: Zingiber officinale
miRNA family: MIR2621
source: miRNEST
Taxonomy by NCBI:
Zingiber officinale Zingiber Zingiberaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCTTGGGCCAGGAATTTGAG miRNA* TGAATTTGTGTGCTCAAGTTAC mismatches: 1 bulges: 1 |
pre-miRNA
ATATTGGTCGAATACACAAAAAGCTTGGGCCAGGAATTTGAGTGTTGGTTTGAATTTGTGTGCTCAAGTTACTTCATTTGTTTTGTTTTG
dot-bracket secondary structure
...(((((.....)).)))..(((((((((((.(((((((((......))))))))).)).)))))))))....................
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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ATATTGGTCGAATACACAAAAAGCTTGGGCCAGGAATTTGAGTGTTGGTTTGAATTTGTGTGCTCAAGTTACTTCATTTGTTTTGTTTTG
dot-bracket secondary structure
...(((((.....)).)))..(((((((((((.(((((((((......))))))))).)).)))))))))....................
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
