miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST002841
species:
Zingiber officinale
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Zingiber officinale
Zingiber
Zingiberaceae
Zingiberales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATATTCATCATCATCGTGC
miRNA*
ACATCATGATAAACATGAAC
mismatches:
4
bulges:
1
View larger
pre-miRNA
CATGTGAATGT
TCATATTCATCATCATCGTGC
ATCAGTCTCCCCATCCCCACAAACAGGTTT
ACATCATGATAAACATGAAC
AAGATGAT
dot-bracket secondary structure
........(((
((((.((.(((((.((.(((.
(((.((................)).))).)
)))).))))).)).))))))
).......
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record