miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST002847
species: Zinnia violacea
miRNA family: MIRf160
source: miRNEST

Taxonomy by NCBI:
Zinnia violacea Zinnia Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGCAGCAGCAGAAGCAGCAG

miRNA*
GCTGCTGCTGCTGCTGACGCC

mismatches: 3
bulges: 0

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pre-miRNA
CGGTTCCCGAAGTGGTGGGGGTTGCAGCAGCAGAAGCAGCAGCGCGATTGCTTCTTGTTAGTTTCCTCCGGAACGGAAGAGATGATTTCCAAATGGACGA
AAAGAAACCACCACCACGATGATGATGATGATGATGAGTTGTTGCTGTTGCCATACATCGACTAGGTAACGCTGCCGCTGCTGCTGCTGCTGCTGCTGAC
GCC
ATCGCCATTGGTGGTGAA


dot-bracket secondary structure
...((((((.((((((((.(((..(((((((((.((((((((((((...(((((((.((.(((((.((((...)))).)))))....(((....))).))
.)))))...(((....((((((((.(((((.((((.....)))).))))).))).)))))....)))...))...))).))))))))).)))))))))..
)))
.))))))))..))).)))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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