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ABOUT THIS RECORD
ID:
MNEST002847
species:
Zinnia violacea
miRNA family:
MIRf160
source:
miRNEST
Taxonomy by NCBI:
Zinnia violacea
Zinnia
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGCAGCAGCAGAAGCAGCAG
miRNA*
GCTGCTGCTGCTGCTGACGCC
mismatches:
3
bulges:
0
View larger
pre-miRNA
CGGTTCCCGAAGTGGTGGGGG
TTGCAGCAGCAGAAGCAGCAG
CGCGATTGCTTCTTGTTAGTTTCCTCCGGAACGGAAGAGATGATTTCCAAATGGACGA
AAAGAAACCACCACCACGATGATGATGATGATGATGAGTTGTTGCTGTTGCCATACATCGACTAGGTAACGCTGCCGCTGCT
GCTGCTGCTGCTGCTGAC
GCC
ATCGCCATTGGTGGTGAA
dot-bracket secondary structure
...((((((.((((((((.((
(..(((((((((.((((((((
((((...(((((((.((.(((((.((((...)))).)))))....(((....))).))
.)))))...(((....((((((((.(((((.((((.....)))).))))).))).)))))....)))...))...))).)))
)))))).)))))))))..
)))
.))))))))..))).)))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record